logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000001354_1|CGC17

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001354_00764
hypothetical protein
TC 901545 902891 + 3.A.1.1.45
MGYG000001354_00765
HTH-type transcriptional repressor CytR
TF 903117 904127 - LacI
MGYG000001354_00766
L-arabinose transport system permease protein AraP
TC 904462 905316 + 3.A.1.1.45
MGYG000001354_00767
L-arabinose transport system permease protein AraQ
TC 905313 906155 + 3.A.1.1.45
MGYG000001354_00768
hypothetical protein
TC 906242 906853 - 9.B.28.1.3
MGYG000001354_00769
Oligo-1,6-glucosidase
CAZyme 906982 908742 + GH13| GH13_30
MGYG000001354_00770
4-alpha-glucanotransferase
CAZyme 908856 911021 - GH77
MGYG000001354_00771
Oligo-1,6-glucosidase 1
CAZyme 911273 912883 - GH13| GH13_44
MGYG000001354_00772
Cyclodextrin-binding protein
TC 913122 914360 + 3.A.1.1.27
MGYG000001354_00773
hypothetical protein
TC 914653 916056 + 3.A.1.1.27
MGYG000001354_00774
Inner membrane ABC transporter permease protein YcjP
TC 916053 916952 + 3.A.1.1.27
MGYG000001354_00775
Pullulanase
CAZyme 916957 919005 + CBM48| CBM68| GH13_14| CBM25| GH13| CBM41| CBM20
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is starch

Protein ID eCAMI subfam CAZyme substrate
MGYG000001354_00769 GH13_e149|3.2.1.20 starch
MGYG000001354_00770 GH77_e1|2.4.1.25 starch
MGYG000001354_00771 GH13_e36
MGYG000001354_00775 GH13_e83|CBM68_e1|CBM48_e41|CBM41_e2|CBM25_e2|CBM20_e23|3.2.1.68|3.2.1.41|3.2.1.1|3.2.1.- starch

Substrate predicted by dbCAN-PUL is starch download this fig


Genomic location